Header Picture

MGH / CVRC Zebrafish Server

Zebrafish Microsatellite Maps

Searchable Zebrafish Microsatellite Map

An on-line database displaying information from the current 3845-marker map.

Recommended for all map users - provides updated maps and detailed information on each marker in searchable form!

 
Zebrafish map 2000

Shimoda et al. (1999) Zebrafish genetic map with 2000 microsatellite markers. Genomics 58:219-232.

 
Map Comparison

Comparison of the zebrafish microsatellite map (Shimoda et al.) and the RAPD map (Postlethwait et al.).

 
Data and graphics or the zebrafish map paper

Knapik, et al. (1998) A microsatellite genetic linkage map for zebrafish (Danio rerio). Nature Genetics 18, 338-343.

A zebrafish genetic linkage map consisting of 705 simple sequence-length polymorphism markers (SSLPs), using 44 F2 progeny from the AB x IN reference cross.

 
Data for zebrafish reference cross DNA panel paper

Knapik et al. (1996) A reference cross DNA panel for zebrafish (Danio rerio) anchored with simple sequence length polymorphisms. Development 123, 451-460.

A reference cross panel of DNA, consisting of 520 F2 progeny (1040 meioses) of an AB x India (IN) intercross that has been anchored to a zebrafish genetic linkage map by 102 simple sequence length polymorphisms.

 

 

Other Zebrafish Resources

An Atlas of Zebrafish Anatomy

Link to the ZFIN anatomical atlas.

 
Zebrafish YAC Library

Zhong, et al. (1998) Zebrafish Genomic Library in Yeast Artificial Chromosome. Genomics 48, 136-138.

A zebrafish yeast artificial chromosome (YAC) library using genomic DNA isolated from the inbred AB zebrafish strain.

 

 

Other Zebrafish Genome Sites
ZFin Database at Univ. of Oregon
Zon Lab - Children's Hospital, Boston
Johnson Lab - WashU
Tubingen RH Map of the Zebrafish Genome
Talbot Lab - Stanford
Halpern Lab - Carnegie Institute of Washington

 

     

  Contact us