Linkage Group 15 SSR Markers

We are in the process of submitting the sequences used to generate the SSR markers to the dbSTS database at NCBI. To view the entry for a specific sequence, use the link in the dbSTS Accession column. If no link is present, we are still preparing its entry for submission.

Marker Number Linkage Group Forward (+) Primer Sequence Length Reverse (-) Primer Sequence Length AB_1 Size AB_2 Size In_1 Size In_2 Size Comments dbSTS Accession
Z24 15 CACCTTCACGGTGAGTAGCA 20 GTGGAATGGTGTGACTAATGTCA 23 149 169 141 157 - -
Z37 15 GGTGTTCGCGACCAAGTC 18 TTTGCGTGGAATTTGAACTG 20 NA NA NA NA - -
Z470 15 GAGAGCCGAGGTGTGTATGC 20 CACTGCCTATTACACCACTGATG 23 113 97 99 - - G41406
Z732 15 GTGCCTTCCGTTACCTTCAC 20 TTTTAAGGAAAAAAAGTGAATGCA 24 133 135 155 - - G41416
Z846 15 CCTCTCAGTCTCCATCACCTG 21 GTGTGTGCTATAATGCCATTGG 22 NA NA NA NA - G41421
Z858 15 CTTCCACATGGTCATTATGGG 21 AACCAGTGGAGCGACCAG 18 NA NA NA NA - G40668
Z940 15 CTGCTAACCAAATGCAGAAGC 21 TAACCTGATGGAAAATCACACG 22 NA NA NA NA - G40786
Z1195 15 AACCCACACCGTCACATCGT 20 ATACGCCACTGACGAGAAGTGG 22 NA NA NA NA Use at your own risk G41339
Z3309 15 CATCCTTCCACACATCTGCAGG 22 TGGAGCTAGCCAGAATAAGCGG 22 NA NA NA NA Use at your own risk -
Z3358 15 GCCTTCATCTCGCCACTGGT 20 CGAATTGTTGGGTGAACTAGCC 22 NA NA NA NA - G40336
Z3735 15 TCTGGGTGAGCCAGAACATTTG 22 TGTGCGCATGTAGGCGTATG 20 NA NA NA NA - G41461
Z3760 15 ACATGGGTGCTCAATCCGCT 20 TCCTTCCCGAACCATCCAGA 20 NA NA NA NA - G40345
Z4396 15 GGGATTGTGGTTCTCCACGC 20 AGGCAGCCCTTTCCTAAAGGC 21 NA NA NA NA - -
Z5191 15 AGTCAGTCAACCCATGCCTGC 21 CGCACATGTGGTTCCCGTAT 20 NA NA NA NA Use at your own risk G41563
Z5223 15 AACAGAGCCGATCTGCCACC 20 AGCACAGCGGAGGAAATAAAGC 22 150 178 198 230 - G41566
Z5393 15 CTCCACTCATACACGGACACCG 22 TGGCTGTAATCCGCCACTGA 20 NA NA NA NA - G40387
Z6024 15 CTGCAGGCTTAATGCATTCA 20 GGCTCAGCAGTTACATGCAA 20 213 - 201 225 - G41812
Z6190 15 GTGATCAGGGCTGAGGAGAG 20 TAGAGGCCTCCGCTGATGA 19 220 244 214 228 - G41813
Z6312 15 TCCTCCTGTGTGTGAACATCA 21 CAGCCATCAGAGAACATCGA 20 189 - 207 219 - G41111
Z6418 15 CACGGCACTTAACAGACAACA 21 TTGCAGACAGTTTCACCTCG 20 199 209 171 189 - G40435
Z6543 15 TACTAATTACCCGCCCCACA 20 CGTTTAGTTGAAGTGAAAGGCC 22 124 - 134 - - G40447
Z6662 15 CGCACATAATTATAGCGTCAAA 22 TGATGGAGAAATCGTCCCTC 20 NA NA NA NA - G41814
Z6712 15 GACAAATTGCACCCTCACCT 20 GCTCGCAGATGTATTGAAAGG 21 287 ? 261 279 - G40463
Z6722 15 GAAAATGGCTTCCGTGCC 18 AACAAATGCAATCACTCACAGG 22 144 - 138 ? - -
Z6895 15 TGAGCATGTTATGACCCATCA 21 CACTAGGGCCGAGAAATGAG 20 ? ? ? - - G41622
Z7070 15 TGGGTGGACTGTGCACTTAA 20 GACACATCGACCTTGTGCC 19 144 188 138 - - G40498
Z7216 15 CACTGAAGCCTGTGAGGACA 20 TCTTGAAGATTGGCATGGCT 20 96 - 106 152 - G40517
Z7381 15 TCCAGTCCACAAAAATGCAA 20 TGACCACAGCAACTCCATTC 20 196 - 138 308 - G40553
Z7474 15 ACACAGACCCGTCCATCTCT 20 CTCAGACTGCCTGCGTACAC 20 72 - 76 84 - G40558
Z7501 15 GGAATTGATTAACTTTTTGGCC 22 TTCTGTTTCATTTCGAGTCTCAA 23 265 291 277 307 - G40563
Z7815 15 TGCTAAACGGATGCTCACTG 20 TCTACCAGTTCAGTGCACGC 20 218 - 156 - - G40595
Z7871 15 CATCCAGTCGAGTTGGACCT 20 GGATGAGAGACAGTCCGAGC 20 224 228 230 - - G40604
Z8064 15 ACATTTCGTTTTGTGTGGCA 20 ATCGACCTGGTGCCCTAAA 19 211 - 205 - - G40622
Z8336 15 TGCGAGTGAAGAAGGATGTG 20 CAACCCCTCTGCTTTCCTC 19 117 - 207 - - G40643
Z8467 15 TTTCCCCGTTGATTTATTCG 20 TTTTGGTTGAGGAAACGCTC 20 245 267 257 319 - G40654
Z8551 15 TGAGTGACGTTCTCCTGCAC 20 TTACATCATGACCTGGGCCT 20 215 241 249 257 - -
Z8991 15 ACCCCTTTTGCCTTTCAGAT 20 CCCCCTCCATTACCTCAGAT 20 277 - 223 - - G41707
Z9041 15 TGTTCAGCTCTCACTGGCC 19 AGTGTCCGTCAAACATGAAGG 21 138 - 170 204 - G41169
Z9189 15 CCCTAGTGGTCACCCGTG 18 GGGACACGTGTGTTTGAGTG 20 148 - 84 - - G40745
Z9214 15 CCCTTTCATTCCATGGGTC 19 TCTACAATTTGTGATGCGCTG 21 180 186 184 - - G40747
Z9320 15 TGAGACTGAGCCACTTCCCT 20 ACGAAGATGGCTGTGATATGG 21 129 - 127 135 - G41638
Z9488 15 GAGAGCAGCTCTCAGAGACCA 21 GCTTTTCCTTCACAAGTGGC 20 340 - 276 - - G40800
Z9738 15 CAGATCCGGAGCTTCAACTC 20 CAGCCAGCAGTGTAAGCTGA 20 - G40832
Z9746 15 CCTTTCTGTTCATGCCCTTC 20 ATGTGGGAATGGAAGTGAGC 20 190 206 176 - - G40834
Z9773 15 TGAGGAGTTCAAGGCTTGCT 20 CCTGCAGACACCCTGTCTTA 20 194 280 202 258 - G41655
Z9894 15 GTGGACGTGAGCGAACACTA 20 GTCCAGGCAGCTCCGAAC 18 145 205 139 201 - G41192
Z10193 15 AGCTTGTTTGATGCCCCTAT 20 CTGCAATCCCATTAAGCGAT 20 ? ? ? ? - G39761
Z10289 15 CACCATATATGTGTTGTTCTGCA 23 CGACACATCACGCCATTTAC 20 - G38911
Z10427 15 TGAGCGCTCTGCTGAACA 18 CTAAGGGCCCACACTGTGTT 20 206 - 202 - - G39792
Z11320 15 ACAGGGTAAGCAGGGAAGCT 20 GCAGAGTCCTTCTGTTTTCTCA 22 237 - 225 - - G39890
Z11323 15 CACTCCAGAGAGGCGTTTTC 20 CCCAAAGCACATGTTCTCCT 20 190 - 176 - G39891
Z11701 15 GAGCGCTGATAGTCTGGACC 20 ACTGGGCTGCAGATCTGACT 20 280 - 360 - - G39949
Z13230 15 TATGAAAAGGCACTTGATGTGG 22 TCTGCGCAGTAATAGCAAACA 21 - - - - - G41815
Z13310 15 TGGTGATCGTAAATAAAAGAGCTG 24 CACCAGATCCAACCCGTATC 20 132 136 132 134 - G40006
Z13481 15 AGGTGAATCAGGTGGAAGGA 20 CGCTCCTCTGTGCAAAATTT 20 ? ? ? - - G40028
Z13705 15 GTCTCCCATCTGCCTGGAG 19 CAGCTTAGATTTGCACAGCG 20 131 - 127 - - G40063
Z13759 15 CGGTGAAACTCCATCCATCT 20 GAGATATGGGGGATTCAGCA 20 102 110 114 160 - G39146
Z13822 15 CAAACTGCTACACTCGAGCG 20 GCGGAGCTGAGTGACATACA 20 134 142 138 154 - G40076
Z13927 15 AACGTCATGAGTGGGAGGAC 20 ATGACAGTGCGACACAGCTC 20 NA NA NA NA - G39161
Z15442 15 GAGTGACCTTTATGGGAGCG 20 AGCACCTGGTTCTGAAAGGG 20 - - - - - G39202
Z17282 15 TGCGTCTCAAAGAACAGGTG 20 TCTCTCTCATGTTGAGCTCTCA 22 244 - 250 268 - G40139
Z20009 15 GAAGACTTTGGCAGACCTGC 20 GGCGTCACCTCTCAGTTTGT 20 125 147 111 117 - G41723
Z20627 15 CAGCAAGGAGTAAAGCGACC 20 CTACGGGCCTGTATCAGTGT 20 163 - 189 201 - G40189
Z20632 15 GAACTCGGACTTTTGCCAAG 20 CTCTGGAGGCAAACCACTTC 20 187 - 167 - - G40191
Z20637 15 AACGTCTGATTGGTTCGTCC 20 AGTTCACGTCCGCTCAGATT 20 260 - 258 278 - G40192
Z20993 15 TTAAATTTGATGCATTTTTACACAA 25 TGAAGTGGACCCCTGTCCTA 20 145 165 237 - - G40215
Z21078 15 GGCCGGAAGAAAATCTCTCT 20 TCCTGTGTTTTCATTGGTGG 20 266 - 268 324 - G40221
Z21165 15 TGTCAGTTCTCTCAGTGGCG 20 AATGGCGCATATAGAAACGC 20 157 - 139 - - G40230
Z21327 15 GAAAGGAGTGGCTTTGTTGG 20 GTGGAGGCGGAAGTGTAAAA 20 227 249 217 - - G40240
Z21329 15 GTCTGCTCCCTCGCTCAG 18 GTGTGATGATGCCAGGTGTC 20 188 - 204 - - G40241
Z21437 15 AGAGCTTTGCGTGGCATC 18 ACCCGGAGTGAATCATCAAG 20 176 - 174 - - G40252
Z21452 15 GCCAAGAGATTGCACATGAC 20 TGATGCAGACAGGATTCTGC 20 144 148 164 - - G40253
Z21982 15 TGGAAAAACATGAATGCTGC 20 AACACCTGCTGGGTAAGTGC 20 190 - 164 - - G40280
Z22027 15 TTTTTCCAGCAGTGAATACTATTG 24 CGGCGTCTGCAATATAACAA 20 296 - 206 - - G39428
Z22081 15 GATTAGAGCGCATTTCCAGC 20 CTGGTGTCAGGGGTGAGTTT 20 116 120 124 126 - G40287
Z22430 15 AGTAGAGCCAAGCGCTTCTG 20 GGGTTATGTGGACTCGCAGT 20 223 251 245 - - G40320
Z22738 15 CGCTGAACTCTCTCTGCATG 20 TGGGTGGAGGACTACCATTC 20 NA NA NA NA - G39514
GOF18 15 GACTCTAGAGGATCATTCTGTGGT 24 CTCCAAACGGATTGAGCTCTCTCT 24 174* NA NA NA "Goff, et al., 1992" none
Linkage group 14LegendLinkage group 16

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Table generated Wed Oct 7 16:28:07 1998