Linkage Group 19 SSR Markers

We are in the process of submitting the sequences used to generate the SSR markers to the dbSTS database at NCBI. To view the entry for a specific sequence, use the link in the dbSTS Accession column. If no link is present, we are still preparing its entry for submission.

Marker Number Linkage Group Forward (+) Primer Sequence Length Reverse (-) Primer Sequence Length AB_1 Size AB_2 Size In_1 Size In_2 Size Comments dbSTS Accession
Z1799B 19 AGCGCTCCTCCGTCTGCTGT 20 TCCGCGTCCATCACTGCGGG 21 NA NA NA NA - -
Z7 19 TCATGAGCAGCGTTTTTCC 19 AAAGCACCATCCCACAAAAC 20 147 - 143 - - -
Z160 19 CGCTACCTGAAGGACACCAT 20 CTGCTATTGCTATACTTGTGGGG 23 NA NA NA NA - -
Z553 19 GGCGTAATCCTCATTCCTGA 20 CAAACTGTGTTGTGTGTTTTTCTG 24 NA NA NA NA - G41409
Z1234 19 CATTTAGATTAGGCCTTCCGG 21 TATTACTGTTTACTTTCAGTGTGGCC 26 NA NA NA NA - G41346
Z1247 19 GGAGGAGCAGCTCTGCAG 18 GTTAACCACTGAGACACCACTCC 23 NA NA NA NA - G41347
Z1271 19 CCGACGAGACCAAGATCAAG 20 GTGACATCAAGTGTGTATCCGG 22 NA NA NA NA - G39993
Z1422 19 ACTCATGCATGAGGTCAGTCT 21 TCATTAAACAAAGATGTGATGCTAA 25 NA NA NA NA Use at your own risk G40115
Z1544 19 ATCGGGAACTTCCTGAACG 19 GATCGAAGCCCTTAGCCTG 19 NA NA NA NA - G41391
Z1625 19 TGGGATACCTGACATCCAGACC 22 GCTTGAGTGAGGACGCGGTT 20 211 - 167 - - G41392
Z1628 19 CAGTATCAGCACACGTGCATGC 22 CCGTATGAGGATGTCCACGC 20 186 - 166 - - G41394
Z1632 19 GCGCATCCTCCTCCTCATCT 20 TCAGATCTCCTTCAGCCTGTCA 22 NA NA NA NA - G41395
Z1651 19 CAGGTACAGCAGTTCCCCATG 21 CACGTACAGCGTCAGCCTGT 20 NA NA NA NA - G41398
Z1803 19 CAGAACCCTGCTGTTCCAGAA 21 AGGTGCACCGTCTGGATCTT 20 189 - 175 183 - -
Z3023 19 AGTTTCATTGTCCAATCACTGTAC 24 GGACTGCAAAAACTTTGAAGCTC 23 NA NA NA NA - -
Z3086 19 CGAAATCCCCTGAAATCTGCC 21 CACACTATGCAGCTCAGGGGC 21 NA NA NA NA - G40330
Z3214 19 CGTCATTGTGAGTCACTGCTGA 22 TTACACAGCCCAGCAGTCCG 20 NA NA NA NA - -
Z3384 19 TATTAGAGGTCTGCATTTCCG 21 CTATTGCACAGACAGCATCACA 22 137 169 n - Use at your own risk -
Z3606 19 AGACAGTTTGTGTATGCGTGCG 22 AATCACTCCTCATTGGCTGCTG 22 160 178 n - Use at your own risk G40339
Z3770 19 AAAGCCTGAGGGACGCACAG 20 TTCAGTGAGGGGTAACGGTGG 21 NA NA NA NA - -
Z3782 19 AATTCTGGGGGGTAATTCTGGC 22 AAGGGGGCTAAACCTTCAACTG 22 93 115 143 201 - G41464
Z3816 19 AGATCAGGTGCACAGTGGCG 20 CCACTGAAGGGCAAGTGGCT 20 NA NA NA NA - -
Z4009 19 TAATGGTTGCCCCGTCCATC 20 TCATGCTGCAAACCCCAGTC 20 281 - 233 - - -
Z4374 19 GCATCTTGACTGTGAAAGT 19 TTCTGTTGGCTATAATAAGG 20 NA NA NA NA - G40359
Z4379 19 TCACACGCCGATCCACATTT 20 TGAATGGTCCCGTTTGTCATT 21 NA NA NA NA - G41512
Z4825 19 AAGCTGCATCCCATCACTG 19 AGAACGGCTAAATTTGGTTGG 21 NA NA NA NA - -
Z5183 19 ACAATCACTTTTGCTCTGGGCC 22 CCGCCATTGCAAACAGTCAC 20 147 - 143 - - G41561
Z5352 19 TTGCCCTGCTATCAAGGGTTG 21 CGTGCATCCAGCAACCAATC 20 149 - 147 151 - G41573
Z5583 19 CGGAGCCACTCAGATCAGCA 20 ACCTCTGAGAACGCAGGTTTGG 22 NA NA NA NA Use at your own risk G41590
Z5675 19 GATGAGGGTGGGCTGGTTTG 20 TGACCCCTGTTTGACCAGTCTG 22 NA NA NA NA - G40397
Z6045 19 CTGCAGGCGCAAATATAACA 20 GGGGGGGCTAATAATTCTGA 20 151 165 149 - - G41102
Z6079 19 TTGTCTCAATGCATCTTGCC 20 AATGCACAAATCGTGAGTAAAA 22 280 - 290 - - G40400
Z6192 19 GCGCAGGACTACATCTCCTC 20 TGTCCTTAGGCTGCCTGTCT 20 185 - 217 - - G41821
Z6275 19 TGCCATCTTCTCCTGCTGG 19 AAAGCAATGATTTTGCTTGTG 21 239 271 239 245 - G39562
Z6412 19 TGCAGAATCATATTCCTGTTCA 22 CAACAACTTCTGATTCATCTGG 22 106 - 122 168 - G40433
Z6589 19 TGTGCTGGAAAGCTCATCC 19 GTGCAGGGGAAGAACAAGAG 20 249 - 239 255 - G41122
Z6661 19 CCTCCAGGATCCTGCAGAAA 20 TTCTCTGACTGCCCTCGG 18 154 - 138 142 - G41822
Z7007 19 TTCAATGAAGATTGGCCTCC 20 TCTCAAATCATTCAGATAGAACCTT 25 ? - ? ? - G40492
Z7058 19 CTGCAGGCCCTGAACATC 18 AGAGTCTGTGTCAGCCGCTT 20 163 - 147 173 - G41770
Z7235 19 TGATTCAAAGCAGAGGCTGA 20 TTCAAGCACGGATTTGAAAA 20 NA NA NA NA - G40525
Z7265 19 GCAGCAACTAATTTGCATTTAA 22 GGTCTCAAGTGTCCCCAGAA 20 155 191 159 195 - G41144
Z7338 19 GGGAGAAGCAATGTTTGGAA 20 CATGTGCTCACACAACCACA 20 276 - 266 - - G40543
Z7430 19 CTCGCCAGAGACATGTAGTCA 21 CCGGTGCTCATCTGGATC 18 263 - 317 - - -
Z7450 19 TCTCACTCATCCAGATCATCTATCA 25 TCACTGGTAAACACTGTCAGCA 22 225 231 177 183 - G40557
Z7686 19 CACCTCAGTCCTGTGAAGCA 20 CATGTTTGCTCCAAAGAGCA 20 163 - 179 187 - G40591
Z7926 19 GCATCTGTGCATGGGTACAG 20 AATCCATCGCATCTGTTTCC 20 148 208 184 228 - G40610
Z7948 19 GAACAGAGGACACCACTGCA 20 TCGACTCTTATTTGCTCCGTG 21 221 - 211 255 - G40612
Z7964 19 CCCATAATGCCTCTGCAGAT 20 TGAAAGGTATGATTGGAACCC 21 186 - 234 - - G40617
Z7981 19 TTTTGCACGCACTTCTTCAC 20 TGCAGGATGTTTTATTCTGGG 21 164 - 142 162 - G40620
Z8487 19 CTGGGCAGATGAACCTGAG 19 GGCCTGCAGACTGGTACAGT 20 254 - 204 230 - G41677
Z9050 19 AATCATTCACTTTCACACGGC 21 TGTGAGTCATCAGTGGAAAACC 22 118 - 114 140 - G40718
Z9059 19 TTCCTGGCAATGTTGTTTTC 20 TGCTACTGTTGAAAACACGTCT 22 252 258 186 246 - G40722
Z9252 19 TGACAACACTCTGTCAGCACC 21 GCATACAAACAGGGGCAAGT 20 193 - 201 205 - G40758
Z9331 19 GGATAAATCCTGGCCTTTCC 20 CAGACACTGCAGAGCTCGAG 20 275 - 269 289 - G41644
Z9384 19 CACCTTTGCCTTGTTTGGAT 20 AGCATAATCAGACAACCGGG 20 115 - 91 - - G40783
Z9468 19 CTGTTTCCATGGAGATGGCT 20 TCTGTATCTCTCACACGCGC 20 157 - 161 179 - G40797
Z9512 19 TGCACACACTCGCATGACA 19 ATGGCCTCTGTGCCTCTG 18 160 164 162 180 - G41184
Z9595 19 AAAAACACACATGCACGTGC 20 GTCTTTGCGTGTCTGTGCAT 20 ? - ? ? - G41187
Z9861 19 TCCACAGCATCGTCCAAAT 19 TGCAGTAAAGCGGCTCTGAC 20 133 - 119 147 - G40850
Z9992 19 CAGTTCATCAACACCCTGCA 20 GGCAGAGTGTGTTTTAGGTGTTC 23 138 - 138 166 - G40876
Z10002 19 CGACGGAGCTTACACAACAA 20 TGATGTCATTGCTCAAAGGG 20 109 - 93 105 - G39737
Z10220 19 GGAATTTCAGCACGGTGTTT 20 GCAGCATTTTCAGAATTGCA 20 275 289 265 283 - G39766
Z10273 19 CAGGGGTGTGGCTTATCTGT 20 TCAGCACTGCAGATCTCAGG 20 144 - 132 148 - G39772
Z10885 19 CCTCCGCTCCATTCAGAATA 20 CTCCTCCAATCAGATGTGCA 20 198 - 148 - - G39838
Z10996 19 CCAGAACACAGGGCTTTCTT 20 CTTTTTCCTCTCGCGTTTTG 20 139 - 159 165 - G41711
Z11027 19 GCCTTATTTTAAAGAACGCGTG 22 GTAGCAATCAGCAGGGAAGC 20 241 247 243 249 - G39859
Z11031 19 TAACGGCATTCCTGAAATCC 20 CACCCAAGCCGCTCTATAAA 20 281 - 265 271 - G41712
Z11380 19 CTGTGCTCAAGAGGAGGGTC 20 AAAGCAGTTCTTTCCCGTGT 20 92 - 108 - - G39902
Z11403 19 TTTGTTTTAAGCATTGCCGA 20 GCATTTTGACTCCACTGGGT 20 177 253 169 - - G39907
Z11506 19 TGATGCGCTTGTTTTTAACG 20 CACTCAGATATGCGTTCATACAC 23 296 - 292 - - G39922
Z11872 19 TGTGGAGGAAGAAGGAAACG 20 ATGTGGGAGTTTTGCACCTC 20 135 183 133 143 - G39968
Z11989 19 ATGTGTCGACGGTGTGAAAA 20 GCAAGAGTGTGTGCGTGC 18 145 - 129 137 - G39980
Z13215 19 GTGTTGATCCCCTGGGCA 18 ACAAGTCCCCACAAGGTCAA 20 124 126 118 - - -
Z13292 19 CAAGGCTGGCGTTATCAGAT 20 GACCACCCACATAAACCCAC 20 216 230 224 - - G40003
Z13345 19 TCTGGACTACACTTAACATCACTGC 25 CAAATCAAGACGCTCTTGCA 20 134 136 142 144 - G40011
Z13509 19 GTTTCTGGGCTCTGAAGACG 20 AAACAGAGCGTGATGCTCCT 20 270 - 264 - - G40030
Z13585 19 ATTCCACAGCCATGTGTCCT 20 GATGTGCCACACCAACAGTC 20 169 173 163 171 - G40042
Z13727 19 AGGATGCAGGAGAGTGATGG 20 GGAACCATTAAGAGTCCGCA 20 159 237 205 - - G40067
Z13773 19 CCCTCTCCTCAACCATAGCA 20 CTGGCATGTAGCACCATACG 20 103 - 111 115 - G40071
Z15451 19 TTGCAGCTACATTTGCGTCT 20 TCAAGAATTGTGTTGTTCCAGC 22 ? - ? - - G41099
Z20054 19 TGGCTCCCTCACACATTACTC 21 TCATACTGGAGCAGCTGTGG 20 124 - 88 - - G40152
Z20396 19 GCCCAAACCTGAGGGATACT 20 GAGCACTTCATGCAGGATCA 20 142 - 166 - - G39253
Z20773 19 CAGCACAAATCATTGGCAAC 20 CCCAAAACACACATAAAAACAAA 23 109 - 115 125 - G40201
Z21077 19 CTTTGATACCACCCCAAACG 20 AGGCTCATCAATCCCACATC 20 247 - 249 253 - G41738
Z21492 19 TACGGCACGCAGATGTTAAA 20 CCACGAGTGTTTAGCTGCTG 20 308 - 256 370 - G40260
Z21694 19 GCCTCAGTTTCTGCAGATACTTTT 24 AGGAAAAGCGTGAAAGCTGA 20 126 - 134 - - G41745
Z22532 19 GCTGGGAATAAAGGACACCA 20 CAGGTGCTGTTTTCAAGCAA 20 NA NA NA NA - G39488
Z22649 19 TGACGTCTGCAGTGAGATCC 20 TACACACACCAGGGGACTGA 20 NA NA NA NA - G39503
Z22818 19 AAGAATCCCGGGATGAAGTT 20 TACTCAGAGGCCCTGAAGGA 20 NA NA NA NA - G41748
Linkage group 18LegendLinkage group 20

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Table generated Wed Oct 7 16:28:07 1998