Linkage Group 22 SSR Markers
We are in the process of submitting the sequences used to generate the SSR markers to the dbSTS database at NCBI. To view the entry for a specific sequence, use the link in the dbSTS Accession column. If no link is present, we are still preparing its entry for submission.| Marker Number | Linkage Group | Forward (+) Primer Sequence | Length | Reverse (-) Primer Sequence | Length | AB_1 Size | AB_2 Size | In_1 Size | In_2 Size | Comments | dbSTS Accession |
|---|
| Z178 | 22 | ACCACAAGCGTGTGAGTCTG | 20 | TTGACTGTGGCCTGCTGTAG | 20 | NA | NA | NA | NA | - | - |
| Z230 | 22 | GGTTCTCCCACCAGCACTAA | 20 | CGACTCAGACTTACTGGTGTGC | 22 | NA | NA | NA | NA | - | - |
| Z669 | 22 | GTGTGTGATGTTGTGTTTGTCG | 22 | GGGGTCACTTCTGTTTACAAGC | 22 | NA | NA | NA | NA | - | G41414 |
| Z684 | 22 | GCTACAGCTCGCCTGTGTG | 19 | ATCCGATACAGCCCGAGTC | 19 | 67 | 79 | 77 | - | - | G40474 |
| Z938 | 22 | CAGACGGACAAGTGGAGGAT | 20 | CAAATGCTTCTCACTTCCTCG | 21 | NA | NA | NA | NA | - | G40781 |
| Z1148 | 22 | GGCTACACCTCAAACGCTTC | 20 | CAACACCTGATCAAACGCC | 19 | 200 | - | 238 | - | - | G41329 |
| Z1691 | 22 | TCAGCGTGGGGCGAGCAGAC | 20 | ACCGGCAGATCTTTGGACAT | 20 | NA | NA | NA | NA | - | G40135 |
| Z3093 | 22 | GTCAGTTGGTGTCCCCCCAC | 20 | CAGCACAGGTATTATGCAGCGG | 22 | 136 | 146 | 164 | - | - | - |
| Z3286 | 22 | CCACACATAGTGGAACCTGCTG | 22 | CTGGAAGTTACATGGAGCGTCA | 22 | 94 | 100 | 94 | 98 | - | - |
| Z3324 | 22 | AAATCAGTGTCCATAGGCCG | 20 | TGTGATGCATCAGGTATGAACA | 22 | NA | NA | NA | NA | - | G40335 |
| Z3579 | 22 | CGCAAATCAAATCAAAATTGCA | 22 | GCAGGCCAAGTGCCTTAATG | 20 | NA | NA | NA | NA | - | G41453 |
| Z4284 | 22 | TGATTGGAAACCGTCGGGAT | 20 | TGATGTTGCAAGGACAGGAAGC | 22 | NA | NA | NA | NA | - | G41494 |
| Z4409 | 22 | TCGGTCCAGCACATAATCAAGC | 22 | AGCCTTGGGAGAGGGACTGG | 20 | 197 | - | 189 | - | Use at your own risk
| G40362 |
| Z4682 | 22 | AAGCCTGGCATTGTTCAGTCTC | 22 | TGCCCGTCAGGAAGTCTTTAGG | 22 | NA | NA | NA | NA | - | G41532 |
| Z4768 | 22 | AGCAGCCCTGGGATTATGAGC | 21 | GGGATTACATCCTGGTATCGCA | 22 | 173 | n | 147 | n | Use at your own risk
| G41537 |
| Z5238 | 22 | TTCCAAATGTATTAAGGGGGCC | 22 | GATAATGGCCAGCGACCTAAGA | 22 | 222 | - | 224 | - | - | G41568 |
| Z5424 | 22 | TCCCCAGAGATGAGTTGCAGC | 21 | TCGAGCCAGAAGACCAAGTGG | 21 | 364 | - | 360 | - | Use at your own risk
| G41577 |
| Z6374 | 22 | AGAGTTGGTGGTTCATTCCG | 20 | TGGAAACCTATGTAATGTCCCC | 22 | 184 | 186 | 186 | - | - | G41114 |
| Z6507 | 22 | GCGTAGACCACTCTGCCTTC | 20 | CATCCATCAAGGCTGCATC | 19 | 320 | - | 324 | 342 | - | G40445 |
| Z6531 | 22 | CCTCAATTCACATCCAGCAG | 20 | TCTGCCGGTTTTCTGTCTG | 19 | 186 | 200 | 248 | - | - | G41120 |
| Z6613 | 22 | TGAGGAGATGAAGTTGCACG | 20 | CCCCAGTGGTTCAACTCG | 18 | 139 | - | 143 | - | - | G40457 |
| Z6805 | 22 | GACATGAAAGAGACGCGTGA | 20 | GTCAACATGACGAGCACTTCA | 21 | 274 | - | 336 | - | - | G40470 |
| Z6850 | 22 | AGGACTATTTCAACAGCGTGC | 21 | TACTCCAGCATCTTCCACCC | 20 | ? | - | ? | ? | - | G40476 |
| Z7125 | 22 | CTGAGAGACCAGGTGAAGGAA | 21 | AGACACATTTTACTGCCCCG | 20 | 236 | - | 184 | 200 | - | G40506 |
| Z7152 | 22 | TTTTTACGCATCGACCTATAGGA | 23 | CGTTTCTGCAGGTGAGTCAA | 20 | 216 | 238 | 206 | - | - | G40511 |
| Z7354 | 22 | GAGATGTGTGATTGCGCACT | 20 | GGATACGCAAAATGTACCCG | 20 | 200 | - | 218 | - | - | G40548 |
| Z7662 | 22 | CTGACGGGTCACTGGACC | 18 | GAAAGACTGACCAGCAGGTTG | 21 | 248 | 256 | 230 | - | - | G40586 |
| Z8369 | 22 | CCGGCTGAGACACGATTC | 18 | CTGACGGGTCACTGGACC | 18 | 123 | - | 105 | - | - | G41855 |
| Z9084 | 22 | GGGACATGATGAAGCAGGTT | 20 | CAGCAAAAATCCCAGCAAAT | 20 | NA | NA | NA | NA | - | G40725 |
| Z9402 | 22 | GGCCACTTTATTGGATTACAGC | 22 | TCATGAAAAGCGAAATATGACC | 22 | 134 | 148 | 132 | - | - | G41640 |
| Z9516 | 22 | GCGTATTTAGCGTCCTGCTC | 20 | CGCTCACAGGAGATCATGAA | 20 | 182 | n | 202 | 218 | - | G40803 |
| Z9752 | 22 | TGCCATTCCAGGTGTGTATC | 20 | CACGTGTCGTCTGAGAAGGA | 20 | 258 | 268 | 260 | 272 | - | G40836 |
| Z9817 | 22 | AATCAGGTCAAAATCTGTCAGG | 22 | GTAACGCTGTACAGACCCCC | 20 | ? | - | ? | -
| - | G40844 |
| Z9970 | 22 | ATCTCTATCTGTGGGCAGCG | 20 | CTCTTTGGCCAGTAGGCAAG | 20 | 243 | ? | 239 | -
| - | G40874 |
| Z10028 | 22 | TGTGGCTCTGATCATCCAAA | 20 | GGGAGTGTGCCCTAGTGTTC | 20 | 248 | 254 | 268 | -
| - | G39741 |
| Z10321 | 22 | CTCTCCGGTCTCCACAAGAG | 20 | TGCGACGTCCTTCTACAATG | 20 | 175 | - | 161 | -
| - | G41692 |
| Z10324 | 22 | GGCGTGAATGTGGGAATATC | 20 | CAATCGTGGCTCCTCTCTTC | 20 | 273 | 321 | 341 | -
| - | G41693 |
| Z10550 | 22 | CGAACAGCTCCTCTTGGTTC | 20 | GCAAAACATGTCAGAAATGTGC | 22 | 209 | - | 227 | -
| - | G41701 |
| Z10673 | 22 | GGCGGGTGACTTGTAGTGAT | 20 | AGCGGTGATTTCAGTGCTTT | 20 | 276 | - | 240 | 244
| - | G41704 |
| Z10788 | 22 | CTCCAGCACGTATCTGTCGA | 20 | CCGCCCTCTGTATGAGTGTT | 20 | 209 | 227 | 229 | -
| - | G41710 |
| Z11042 | 22 | TTCTCGCTGGACAGGAAGTT | 20 | GTGGAGGTTCAAGACACGGT | 20 | 133 | - | 153 | -
| - | G39860 |
| Z11053 | 22 | CCACGATCCTGACTCACAAA | 20 | GTTCAGCACATCCTCCTGGT | 20 | 277 | - | 179 | -
| - | G39863 |
| Z11262 | 22 | ATTCACAGGGCACAGTTTCC | 20 | GATCCAGGAGTGCGAAGATC | 20 | 217 | 299 | 245 | -
| - | G39884 |
| Z11379 | 22 | AATAAAGCTGGGGGCTTGTT | 20 | GGAGGATGGAGACATGGAGA | 20 | 107 | 133 | 117 | 139
| - | G39900 |
| Z11679 | 22 | GGCATTTAAACGGCACACTT | 20 | GCTTTTGCGTGTGAACAGAA | 20 | 185 | - | 187 | 199
| - | G39944 |
| Z11752 | 22 | CTGATGACGAAATACCGGCT | 20 | GCCACAGCTCTTCATCTATATTG | 23 | 150 | 164 | 140 | -
| - | G41750 |
| Z11753 | 22 | CAACTGGGTCACTGTGTTGC | 20 | AGCAAGAAGATCTGCAGCAT | 20 | 143 | - | 129 | -
| - | G39954 |
| Z13223 | 22 | TCTGACTTTGCTGAGCTGGA | 20 | CCAAGAACCATTAGAAACTGCA | 22 | 210 | - | 152 | 154
| - | G41825 |
| Z13529 | 22 | CCAAGGGAAGTTAACAGAACG | 21 | GAGCTTCAAGGCTCCTCAGA | 20 | 267 | - | 283 | -
| - | G40033 |
| Z13794 | 22 | GCTGGTTGAATGAGGGTTGT | 20 | TGACAGCAGTTGCGGATTAG | 20 | 226 | 228 | 213 | 230
| - | G40074 |
| Z13803 | 22 | AGCTGCGCAAGACAGCTTAT | 20 | CATGTGGTCATGTCTCCTGG | 20 | 152 | 158 | 146 | -
| - | G40075 |
| Z13966 | 22 | TTGGTTCACACTTCAGCCTG | 20 | CATCCTGTAAATGCACACGC | 20 | ? | - | ? | ?
| - | G41721 |
| Z20082 | 22 | GGCACACACATATCAGCCTG | 20 | TTAAAGCTTCGGGTGAGGTG | 20 | 120 | ? | 104 | 108
| - | G41726 |
| Z20168 | 22 | GACGGAGAGTATCTGGGCAC | 20 | AGACGTCAGACCATCCAACC | 20 | 213 | - | 229 | -
| - | G40329 |
| Z21243 | 22 | TCGACATGCCAATAACACGT | 20 | TGACACATTCAGTGGCCATT | 20 | 201 | - | 179 | 199
| - | G40234 |
| Z21252 | 22 | TAACCATCCACCCTGAAAGC | 20 | ATGTCATACCCGGAGAGACG | 20 | NA | NA | NA | NA
| - | G40235 |
| Z21507 | 22 | TCCAGACTACAATGATGGTGCT | 22 | TAAAGTGGCTGCCAAATGGT | 20 | NA | NA | NA | NA
| - | G39364 |
| Z22419 | 22 | ATTCGCAGGCTAAACATTGC | 20 | CTGAACACGTCACACACGTG | 20 | 158 | - | 160 | -
| - | G40318 |
| Z22935 | 22 | GGAATCTAGCAGCCCCTCTC | 20 | CATAGCGACAAAGAGGAGGC | 20 | NA | NA | NA | NA
| - | G39529 |
| Z23048 | 22 | CAAAGCAGAGCTGTTTTCCC | 20 | TCCCTCGTGATGAAGTTATGC | 21 | NA | NA | NA | NA | - | G39542 |
If you have questions, comments or problems contact us.Back to IndexTable generated Wed Oct 7 16:28:07 1998